Could the common bristlenose pleco be Ancistrus martini (A. bodenhameri)?
Posted: 06 Aug 2024, 20:02
It's been a while since I first starting this thread back in 2012 after DNA sequencing a common Ancistrus and trying to put a name on it ...
Little has happened since then, but the genetic databases have been slowly filling up with wild caught material. I hoped that, one day, someone in South America would sequence a fish from a native population and we'd get a match. I even wrote some code last year to automate the phylogenetic analysis, called 'ancistr' (@Jools suggested this because it's written in R language). See https://github.com/boopsboops/ancistr.
So, I ran it today, and up pops a match from a newly submitted sequence: (synonym Ancistrus bodenhameri) caught near CĂșcuta, Colombia, in the Maracaibo Basin.
Here is the report (download the html file and open in your browser): https://www.dropbox.com/scl/fi/vk6jixqv ... tm96i&dl=1.
I know @Shane knows a lot about this region, so will be interested to hear his opinion. Looks like he was on the money back in 2007!
It's possible that these are common aquarium trade bristlenose simply released in Colombia, but the collection site while close as the crow flies, appears to be in a separate catchment to CĂșcuta, so they would have to be quite wide distribution if they are there.
Remember the usual caveat: mitochondrial DNA (COI) here, so it does not tell us much about hybridisation. However, it is a starting point to investigate further. So far we have common bristlenose samples from New Zealand, South Africa, Germany, South Korea. All of these fall in the same cluster, so looks like these all have the same maternal inheritance.
[Edited to fix missing localities in the report - please download again]
Little has happened since then, but the genetic databases have been slowly filling up with wild caught material. I hoped that, one day, someone in South America would sequence a fish from a native population and we'd get a match. I even wrote some code last year to automate the phylogenetic analysis, called 'ancistr' (@Jools suggested this because it's written in R language). See https://github.com/boopsboops/ancistr.
So, I ran it today, and up pops a match from a newly submitted sequence: (synonym Ancistrus bodenhameri) caught near CĂșcuta, Colombia, in the Maracaibo Basin.
Here is the report (download the html file and open in your browser): https://www.dropbox.com/scl/fi/vk6jixqv ... tm96i&dl=1.
I know @Shane knows a lot about this region, so will be interested to hear his opinion. Looks like he was on the money back in 2007!
It's possible that these are common aquarium trade bristlenose simply released in Colombia, but the collection site while close as the crow flies, appears to be in a separate catchment to CĂșcuta, so they would have to be quite wide distribution if they are there.
Remember the usual caveat: mitochondrial DNA (COI) here, so it does not tell us much about hybridisation. However, it is a starting point to investigate further. So far we have common bristlenose samples from New Zealand, South Africa, Germany, South Korea. All of these fall in the same cluster, so looks like these all have the same maternal inheritance.
[Edited to fix missing localities in the report - please download again]